Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817328.1_cds_XP_016499137.1_13091
CDS Infomation

[gene=LOC107817777] [db_xref=GeneID:107817777] [protein=TOM1-like protein 2] [protein_id=XP_016499137.1] [location=complement(join(7099..7518,11685..11930,12159..12680))] [gbkey=CDS]
Sequence

ATGAGTGACAACAATTTGTTGGATAAAGTCAGCGCCTTTGGGGAGCGCTTGAAGATTGGG
GGAACGGAGGTTGGGCAAAAGATCACTGCTGGAATGAGCTCGATGAGTTTCAAGATGAAG
GAGCTTTTCCAAGGCCCAAATCAGGCTGATAAGCTTGTCGAGGAAGCCACAGCTGAAACT
CTGGATGAACCTGATTGGGCTATGAATCTTGAGCTTTGTGACATGATTAATCACGATAGA
ATCAATAGTGTTGAACTGATAAGGGGCGTAAAGAAAAGGATAATGCTGAAGAGCCCTAGG
ATTCAGTACTTAGGGTTGGTGTTACTTGAAACTATTGCAAAGAATTGCGAGAAGGCATTC
TCAGAGATTGCAGCTGAGAGGGTTCTGGATGAGATGGTGAAGCTGATTGATGACCCTCAA
ACTGTTGTTAACAATCGGAACAAGGCCCTGGTGTTAATTGAAGCTTGGGGAGAATCATCG
AGTGAGCTTCGCTATTTACCTGTGTATGAAGAGACTTACAAGAGTTTGAGATCCAGAGGG
GTACGTTTTCCTGGTCGTGACCATGAAAGCCTAGCTCCGATCTTCACTCCTCCAAGAACA
GTGTCAGCTTCAGAACCAGATGTTACTCTGGCACAGCAAATCCAACATGAAATTCCACGG
GAGAACTTTTCAGCTGAACAGACAAAGGAGGCATTTGATGTGGCTAGAAACAGTGTAGAG
CTTCTGACAACTGTTTTGTCCTCTTCACCTCAACAGGATGCTCTGCAGGATGACTTGACA
ACTACGCTAGTACAACAGTGTCGCCAGTCCCTCAATACTGTTCAGAGAATCATCGAGACT
GCTGGAGATAATGAGGCCCTCCTTTTTGAAGCCCTGAATATAAATGATGAAGTCCAAAAG
GCCCTCTCGAAGTACGACGAGTTGAAGAAACCTATGGTTGTTTCATCAGAGCCAGAACCT
GCCATGATTCCAGTTGCTGTGGAGCCCGATGAGTCCCCCCGTGCTGGAAAAGAAGATGCT
CTGATCAGAAAACCAGCAGGCTCCCGGTCTGCAGTCCATGGAGGGAATGATGACATGATG
GATGATCTTGATGAGATGATTTTTGGTAAAAAAGCGGGTGGCACATCTGAATCAGGACAT
GACACAAAGAAGCAGCAATCACCAAAAGATGATCTCATCTCATTTTGA

Peptide Sequence

PEP ID

XP_016499137.1
PEP Infomation

PREDICTED: TOM1-like protein 2 [Nicotiana tabacum]
Sequence

MSDNNLLDKVSAFGERLKIGGTEVGQKITAGMSSMSFKMKELFQGPNQADKLVEEATAET
LDEPDWAMNLELCDMINHDRINSVELIRGVKKRIMLKSPRIQYLGLVLLETIAKNCEKAF
SEIAAERVLDEMVKLIDDPQTVVNNRNKALVLIEAWGESSSELRYLPVYEETYKSLRSRG
VRFPGRDHESLAPIFTPPRTVSASEPDVTLAQQIQHEIPRENFSAEQTKEAFDVARNSVE
LLTTVLSSSPQQDALQDDLTTTLVQQCRQSLNTVQRIIETAGDNEALLFEALNINDEVQK
ALSKYDELKKPMVVSSEPEPAMIPVAVEPDESPRAGKEDALIRKPAGSRSAVHGGNDDMM
DDLDEMIFGKKAGGTSESGHDTKKQQSPKDDLISF

Transcript Sequence

Gene sequence data has not been registered.